WormBase Tree Display for Variation: WBVar00093808
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WBVar00093808 | Evidence | Paper_evidence | WBPaper00061133 | ||
---|---|---|---|---|---|
Name | Public_name | ok2704 | |||
Other_name | W03A5.3.1:c.4_298-4delinsAAAGAACCTTCATTTGCAGAA | ||||
HGVSg | CHROMOSOME_III:g.5413418_5413990delinsTTCTGCAAATGAAGGTTCTTT | ||||
Sequence_details | SMap | S_parent | Sequence | W03A5 | |
Flanking_sequences | cgagtccgaaggggtggatttcatgttctg | cattctgcaaatgaaggttctgaagaaaat | |||
Mapping_target | W03A5 | ||||
Type_of_mutation | Insertion | TTCTGCAAATGAAGGTTCTTT | |||
Deletion | |||||
PCR_product | OK2704_external | ||||
OK2704_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037161 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00001731 | |||
Transcript | W03A5.3.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | W03A5.3.1:c.4_298-4delinsAAAGAACCTTCATTTGCAGAA | ||||
cDNA_position | 22-? | ||||
CDS_position | 4-? | ||||
Protein_position | 2-? | ||||
Intron_number | 2-3/4 | ||||
Exon_number | 2-3/5 | ||||
Isolation | Mutagen | EMS | |||
Reference | WBPaper00061133 | ||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |