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WormBase Tree Display for Variation: WBVar00093856

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Name Class

WBVar00093856NamePublic_nameok2756
HGVSgCHROMOSOME_III:g.5173697_5174243del
Sequence_detailsSMapS_parentSequenceK10D2
Flanking_sequencestcacttgcaagacagtgtggctattctgacagaaacgccacttttatttatttatcaact
Mapping_targetK10D2
Type_of_mutationDeletion
PCR_productOK2756_external
OK2756_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00037296
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00019629
WBGene00019630
TranscriptK10D2.4.1VEP_consequencecoding_sequence_variant,3_prime_UTR_variant
VEP_impactMODIFIER
cDNA_position190-?
CDS_position183-?
Protein_position61-?
Exon_number3-4/4
K10D2.3.1VEP_consequencesplice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
VEP_impactHIGH
Intron_number2/13
Exon_number1-2/14
IsolationMutagenEMS
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele