WormBase Tree Display for Variation: WBVar00093868

WBVar00093868 Name: Public_name: ok2770
    Other_name: F56D6.2.2:c.438_771+90del
      F56D6.2.1:c.438_771+90del
    HGVSg: CHROMOSOME_IV:g.3922930_3923447del
  Sequence_details: SMap: S_parent: Sequence: F56D6
    Flanking_sequences: cgagaagaattactttgtgtgtagctacga agatttctcaactgatttcacatggtgtac
    Mapping_target: F56D6
    Type_of_mutation: Deletion
    PCR_product: ok2770_external
      ok2770_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032778
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00018971
    Transcript: F56D6.2.2 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F56D6.2.2:c.438_771+90del
        cDNA_position: 468-?
        CDS_position: 438-?
        Protein_position: 146-?
        Intron_number: 3-5/10
        Exon_number: 3-5/11
      F56D6.2.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: F56D6.2.1:c.438_771+90del
        cDNA_position: 468-?
        CDS_position: 438-?
        Protein_position: 146-?
        Intron_number: 3-5/10
        Exon_number: 3-5/11
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele