WormBase Tree Display for Variation: WBVar00093876
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| WBVar00093876 | Name | Public_name | ok2778 | ||
|---|---|---|---|---|---|
| HGVSg | CHROMOSOME_IV:g.3440074_3440512delinsGGCCCAGAGTCTTCA | ||||
| Sequence_details | SMap | S_parent | Sequence | W05E7 | |
| Flanking_sequences | gcaagttccagtccaacagttacaccttgg | ccaaaagggcccagagtcttcagaaaaagg | |||
| Mapping_target | W05E7 | ||||
| Type_of_mutation | Insertion | GGCCCAGAGTCTTCA | |||
| Deletion | |||||
| PCR_product | ok2778_external | ||||
| ok2778_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00032786 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00001692 | |||
| Transcript | W05E7.1.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,3_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| cDNA_position | 362-? | ||||
| CDS_position | 338-? | ||||
| Protein_position | 113-? | ||||
| Intron_number | 3/4 | ||||
| Exon_number | 3-5/5 | ||||
| Isolation | Mutagen | EMS | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
