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WormBase Tree Display for Variation: WBVar00093879

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Name Class

WBVar00093879NamePublic_nameok2781
Other_nameF23B2.5b.1:c.56_155-125del
F23B2.4.1:c.56+917_57-556del
F23B2.5a.1:c.56_155-125del
F23B2.5c.1:c.56_155-125del
HGVSgCHROMOSOME_IV:g.9144814_9145224del
Sequence_detailsSMapS_parentSequenceF23B2
Flanking_sequencesataatttcaaaattataattattattcaggactttgcgcctaaatgtacaaaataagaga
Mapping_targetF23B2
Type_of_mutationDeletion
PCR_productok2781_external
ok2781_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00032789
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00000906
WBGene00001444
TranscriptF23B2.5b.1VEP_consequencesplice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScF23B2.5b.1:c.56_155-125del
cDNA_position56-?
CDS_position56-?
Protein_position19-?
Intron_number2/6
Exon_number2/7
F23B2.4.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF23B2.4.1:c.56+917_57-556del
Intron_number2/20
F23B2.5c.1VEP_consequencesplice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScF23B2.5c.1:c.56_155-125del
cDNA_position56-?
CDS_position56-?
Protein_position19-?
Intron_number2/6
Exon_number2/7
F23B2.5a.1VEP_consequencesplice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScF23B2.5a.1:c.56_155-125del
cDNA_position64-?
CDS_position56-?
Protein_position19-?
Intron_number3/7
Exon_number3/8
IsolationMutagenEMS
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele