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WormBase Tree Display for Variation: WBVar00093910

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Name Class

WBVar00093910NamePublic_nameok2813
Other_nameC39B10.1.1:c.333_834+15delinsTCCAATCTATGGACCA
HGVSgCHROMOSOME_X:g.10462251_10462894delinsTGGTCCATAGATTGGA
Sequence_detailsSMapS_parentSequenceC39B10
Flanking_sequencesaaatttgtaagatgcaactctcagattaacgtgacactgtatatcaacgacggaatgcag
Mapping_targetC39B10
Type_of_mutationInsertionTGGTCCATAGATTGGA
Deletion
PCR_productOK2813_external
OK2813_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00037048
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00008021
TranscriptC39B10.1.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScC39B10.1.1:c.333_834+15delinsTCCAATCTATGGACCA
cDNA_position395-?
CDS_position333-?
Protein_position111-?
Intron_number5-7/12
Exon_number5-7/13
IsolationMutagenEMS
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele