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WormBase Tree Display for Variation: WBVar00093925

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Name Class

WBVar00093925NamePublic_nameok2829
Other_nameF54C9.2.1:c.227+15_735delinsGTTTTAA
HGVSgCHROMOSOME_II:g.8565117_8565758delinsTTAAAAC
Sequence_detailsSMapS_parentSequenceF54C9
Flanking_sequencestgcttgagttacaaaaactcctccttgaagtcattaaaacttacaagaaagcaacgacac
Mapping_targetF54C9
Type_of_mutationInsertionTTAAAAC
Deletion
PCR_productok2829_external
ok2829_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00037244
LaboratoryRB
PersonWBPerson46
KO_consortium_allele
StatusLive
AffectsGeneWBGene00006059
TranscriptF54C9.2.1VEP_consequencesplice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
VEP_impactHIGH
HGVScF54C9.2.1:c.227+15_735delinsGTTTTAA
cDNA_position?-767
CDS_position?-735
Protein_position?-245
Intron_number4-6/9
Exon_number5-7/10
IsolationMutagenEMS
RemarkSequenced by the C. elegans Gene Knockout ConsortiumPaper_evidenceWBPaper00041807
MethodKO_consortium_allele