WormBase Tree Display for Variation: WBVar00093925
expand all nodes | collapse all nodes | view schema
WBVar00093925 | Name | Public_name | ok2829 | ||
---|---|---|---|---|---|
Other_name | F54C9.2.1:c.227+15_735delinsGTTTTAA | ||||
HGVSg | CHROMOSOME_II:g.8565117_8565758delinsTTAAAAC | ||||
Sequence_details | SMap | S_parent | Sequence | F54C9 | |
Flanking_sequences | tgcttgagttacaaaaactcctccttgaag | tcattaaaacttacaagaaagcaacgacac | |||
Mapping_target | F54C9 | ||||
Type_of_mutation | Insertion | TTAAAAC | |||
Deletion | |||||
PCR_product | ok2829_external | ||||
ok2829_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037244 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00006059 | |||
Transcript | F54C9.2.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | F54C9.2.1:c.227+15_735delinsGTTTTAA | ||||
cDNA_position | ?-767 | ||||
CDS_position | ?-735 | ||||
Protein_position | ?-245 | ||||
Intron_number | 4-6/9 | ||||
Exon_number | 5-7/10 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |