WormBase Tree Display for Variation: WBVar00093951
expand all nodes | collapse all nodes | view schema
| WBVar00093951 | Name | Public_name | ok2856 | ||
|---|---|---|---|---|---|
| HGVSg | CHROMOSOME_I:g.3908617_3909291del | ||||
| Sequence_details | SMap | S_parent | Sequence | T20F5 | |
| Flanking_sequences | gtcaaatagtgcgcattgggcgcgcacacc | attatggatcgtgaatacaaaaaaggtaag | |||
| Mapping_target | T20F5 | ||||
| Type_of_mutation | Deletion | ||||
| PCR_product | OK2856_external | ||||
| OK2856_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00037191 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00003950 | |||
| Transcript | T20F5.2.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| cDNA_position | ?-446 | ||||
| CDS_position | ?-441 | ||||
| Protein_position | ?-147 | ||||
| Intron_number | 2-3/5 | ||||
| Exon_number | 1-4/6 | ||||
| Isolation | Mutagen | EMS | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
