WormBase Tree Display for Variation: WBVar00093952
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WBVar00093952 | Name | Public_name | ok2857 | ||
---|---|---|---|---|---|
Other_name | W02D9.3.1:c.327+38_607+96del | ||||
HGVSg | CHROMOSOME_I:g.12535691_12536166del | ||||
Sequence_details | SMap | S_parent | Sequence | W02D9 | |
Flanking_sequences | aagcctgcacgagaaacgcgccaacgtcca | aaagtacgtaaacaccgtacactctacgca | |||
Mapping_target | W02D9 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok2857_external | ||||
ok2857_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00032825 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00012209 | |||
Transcript | W02D9.3.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | W02D9.3.1:c.327+38_607+96del | ||||
Intron_number | 2-4/7 | ||||
Exon_number | 3-4/8 | ||||
Isolation | Mutagen | EMS | |||
Description | Phenotype_not_observed | WBPhenotype:0001175 | Paper_evidence | WBPaper00048917 | |
Curator_confirmed | WBPerson721 | ||||
Reference | WBPaper00048917 | ||||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |