WormBase Tree Display for Variation: WBVar00093974

WBVar00093974 Name: Public_name: ok2880
    Other_name: Y46H3C.1a.1:c.45-14_354del
      Y46H3C.1b.1:c.45-14_354del
    HGVSg: CHROMOSOME_V:g.1711424_1711796del
  Sequence_details: SMap: S_parent: Sequence: Y46H3C
    Flanking_sequences: aactcaattcacaatactccttttaatttc atggccactgtgagattggtactagttaag
    Mapping_target: Y46H3C
    Type_of_mutation: Deletion
    PCR_product: ok2880_external
      ok2880_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032831
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00005847
    Transcript: Y46H3C.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y46H3C.1b.1:c.45-14_354del
        cDNA_position: ?-354
        CDS_position: ?-354
        Protein_position: ?-118
        Intron_number: 1-2/5
        Exon_number: 2-3/6
      Y46H3C.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: Y46H3C.1a.1:c.45-14_354del
        cDNA_position: ?-354
        CDS_position: ?-354
        Protein_position: ?-118
        Intron_number: 1-2/6
        Exon_number: 2-3/7
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele