WormBase Tree Display for Variation: WBVar00094000
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WBVar00094000 | Name | Public_name | ok2909 | ||
---|---|---|---|---|---|
Other_name | T08G11.4b.1:c.986_1350+8delinsAT | ||||
T08G11.4a.1:c.1199_1563+8delinsAT | |||||
HGVSg | CHROMOSOME_I:g.8903054_8903558delinsAT | ||||
Sequence_details | SMap | S_parent | Sequence | T08G11 | |
Flanking_sequences | caaatgagactaatgatgttctaagtatat | cagtgaatgcatcgacaacaacagaaacat | |||
Mapping_target | T08G11 | ||||
Type_of_mutation | Insertion | AT | |||
Deletion | |||||
PCR_product | OK2909_external | ||||
OK2909_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037226 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00011631 | |||
Transcript | T08G11.4b.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | T08G11.4b.1:c.986_1350+8delinsAT | ||||
cDNA_position | 986-? | ||||
CDS_position | 986-? | ||||
Protein_position | 329-? | ||||
Intron_number | 5-6/6 | ||||
Exon_number | 5-6/7 | ||||
T08G11.4a.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
VEP_impact | HIGH | ||||
HGVSc | T08G11.4a.1:c.1199_1563+8delinsAT | ||||
cDNA_position | 1199-? | ||||
CDS_position | 1199-? | ||||
Protein_position | 400-? | ||||
Intron_number | 6-7/8 | ||||
Exon_number | 6-7/9 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |