WormBase Tree Display for Variation: WBVar00094013

WBVar00094013 Name: Public_name: ok2922
    Other_name: C18H9.8b.1:c.244+25_572del
      C18H9.8a.1:c.379+25_707del
    HGVSg: CHROMOSOME_II:g.6680774_6681180del
  Sequence_details: SMap: S_parent: Sequence: C18H9
    Flanking_sequences: ctggaagtatgtatattctagactccattc aaaagaagaggaacttcaaggattggaaat
    Mapping_target: C18H9
    Type_of_mutation: Deletion
    PCR_product: ok2922_external
      ok2922_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032844
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00016005
    Transcript: C18H9.8a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C18H9.8a.1:c.379+25_707del
        cDNA_position: ?-817
        CDS_position: ?-707
        Protein_position: ?-236
        Intron_number: 4-5/10
        Exon_number: 5-6/11
      C18H9.8b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: C18H9.8b.1:c.244+25_572del
        cDNA_position: ?-572
        CDS_position: ?-572
        Protein_position: ?-191
        Intron_number: 2-3/7
        Exon_number: 3-4/8
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele