WormBase Tree Display for Variation: WBVar00094017
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| WBVar00094017 | Name | Public_name | ok2928 | ||
|---|---|---|---|---|---|
| Other_name | T24D11.1e.1:c.811_1317+314delinsAAGA | ||||
| T24D11.1a.1:c.622_1128+314delinsAAGA | |||||
| T24D11.1d.1:c.502_1008+314delinsAAGA | |||||
| T24D11.1b.1:c.802_1308+314delinsAAGA | |||||
| HGVSg | CHROMOSOME_X:g.16406073_16406893delinsTCTT | ||||
| Sequence_details | SMap | S_parent | Sequence | T24D11 | |
| Flanking_sequences | ttgatacaacttttttttgcacaaagagaa | ttcttcgggcatctggaggagcaagagacc | |||
| Mapping_target | T24D11 | ||||
| Type_of_mutation | Insertion | TCTT | |||
| Deletion | |||||
| PCR_product | OK2928_external | ||||
| OK2928_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00037207 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020770 | |||
| Transcript | T24D11.1d.1 | VEP_consequence | splice_donor_variant,coding_sequence_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | T24D11.1d.1:c.502_1008+314delinsAAGA | ||||
| cDNA_position | 502-? | ||||
| CDS_position | 502-? | ||||
| Protein_position | 168-? | ||||
| Intron_number | 4/9 | ||||
| Exon_number | 4/10 | ||||
| T24D11.1a.1 | VEP_consequence | splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | T24D11.1a.1:c.622_1128+314delinsAAGA | ||||
| cDNA_position | 622-? | ||||
| CDS_position | 622-? | ||||
| Protein_position | 208-? | ||||
| Intron_number | 5/10 | ||||
| Exon_number | 5/11 | ||||
| T24D11.1e.1 | VEP_consequence | splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | T24D11.1e.1:c.811_1317+314delinsAAGA | ||||
| cDNA_position | 811-? | ||||
| CDS_position | 811-? | ||||
| Protein_position | 271-? | ||||
| Intron_number | 6/11 | ||||
| Exon_number | 6/12 | ||||
| T24D11.1b.1 | VEP_consequence | splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | T24D11.1b.1:c.802_1308+314delinsAAGA | ||||
| cDNA_position | 802-? | ||||
| CDS_position | 802-? | ||||
| Protein_position | 268-? | ||||
| Intron_number | 6/11 | ||||
| Exon_number | 6/12 | ||||
| Isolation | Mutagen | EMS | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
