WormBase Tree Display for Variation: WBVar00094054
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WBVar00094054 | Name | Public_name | ok2967 | ||
---|---|---|---|---|---|
Other_name | K06A5.2.1:c.123+6_661del | ||||
HGVSg | CHROMOSOME_I:g.6468310_6468976del | ||||
Sequence_details | SMap | S_parent | Sequence | K06A5 | |
Flanking_sequences | agctggtattgacattgcaattgctgtatg | cagtgatgaacccgacttgtaagttgcttg | |||
Mapping_target | K06A5 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | OK2967_external | ||||
OK2967_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037283 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00019430 | |||
Transcript | K06A5.2.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | K06A5.2.1:c.123+6_661del | ||||
cDNA_position | ?-730 | ||||
CDS_position | ?-661 | ||||
Protein_position | ?-221 | ||||
Intron_number | 2-4/6 | ||||
Exon_number | 3-5/7 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |