WormBase Tree Display for Variation: WBVar00094063
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| WBVar00094063 | Name | Public_name | ok2976 | ||
|---|---|---|---|---|---|
| Other_name | K08D10.14.2:c.-15_391delinsTCGGCACAATCCGAACAA | ||||
| K08D10.14.1:c.-15_391delinsTCGGCACAATCCGAACAA | |||||
| HGVSg | CHROMOSOME_IV:g.4156239_4156917delinsTCGGCACAATCCGAACAA | ||||
| Sequence_details | SMap | S_parent | Sequence | K08D10 | |
| Flanking_sequences | gttgacattactaatctagtagccaaaatt | atggtagttatctcagtgctgctatctaca | |||
| Mapping_target | K08D10 | ||||
| Type_of_mutation | Insertion | TCGGCACAATCCGAACAA | |||
| Deletion | |||||
| PCR_product | ok2976_external | ||||
| ok2976_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00032877 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00219216 | |||
| WBGene00305518 | |||||
| Transcript | K08D10.14.2 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,start_lost,5_prime_UTR_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | K08D10.14.2:c.-15_391delinsTCGGCACAATCCGAACAA | ||||
| cDNA_position | 167-572 | ||||
| CDS_position | ?-391 | ||||
| Protein_position | ?-131 | ||||
| Intron_number | 3-5/7 | ||||
| Exon_number | 2-6/8 | ||||
| K08D10.14.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,start_lost,5_prime_UTR_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | K08D10.14.1:c.-15_391delinsTCGGCACAATCCGAACAA | ||||
| cDNA_position | 562-967 | ||||
| CDS_position | ?-391 | ||||
| Protein_position | ?-131 | ||||
| Intron_number | 4-6/8 | ||||
| Exon_number | 3-7/9 | ||||
| K08D10.21 | |||||
| Isolation | Mutagen | EMS | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
