WormBase Tree Display for Variation: WBVar00094069
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WBVar00094069 | Name | Public_name | ok2982 | ||
---|---|---|---|---|---|
Other_name | F59D8.2.1:c.1149+24_1717del | ||||
HGVSg | CHROMOSOME_X:g.3562138_3562729del | ||||
Sequence_details | SMap | S_parent | Sequence | F59D8 | |
Flanking_sequences | ttctccaaagagcagccatacggagctctg | attatgaaatgtgtattggttaccttcttc | |||
Mapping_target | F59D8 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok2982_external | ||||
ok2982_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00032883 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00006928 | |||
Transcript | F59D8.2.1 | VEP_consequence | splice_acceptor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | F59D8.2.1:c.1149+24_1717del | ||||
cDNA_position | ?-1717 | ||||
CDS_position | ?-1717 | ||||
Protein_position | ?-573 | ||||
Intron_number | 2/6 | ||||
Exon_number | 3/7 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |