WormBase Tree Display for Variation: WBVar00094099
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WBVar00094099 | Name | Public_name | ok3013 | ||
---|---|---|---|---|---|
Other_name | Y50D7A.6.4:c.736_968delinsTTTTTTTTCAGATTGCAAACGTTGGGCCTGCCACGTACAATTATGACGAGACGCTTTCCACGCTGAA | ||||
Y50D7A.6.2:c.736_968delinsTTTTTTTTCAGATTGCAAACGTTGGGCCTGCCACGTACAATTATGACGAGACGCTTTCCACGCTGAA | |||||
CE26143:p.Thr246PhefsTer22 | |||||
Y50D7A.6.3:c.736_968delinsTTTTTTTTCAGATTGCAAACGTTGGGCCTGCCACGTACAATTATGACGAGACGCTTTCCACGCTGAA | |||||
Y50D7A.6.1:c.736_968delinsTTTTTTTTCAGATTGCAAACGTTGGGCCTGCCACGTACAATTATGACGAGACGCTTTCCACGCTGAA | |||||
HGVSg | CHROMOSOME_III:g.223338_223959delinsTTTTTTTTCAGATTGCAAACGTTGGGCCTGCCACGTACAATTATGACGAGACGCTTTCCACGCTGAA | ||||
Sequence_details | SMap | S_parent | Sequence | Y50D7A | |
Flanking_sequences | gatctggccggctcagagcgccagagcaaa | atacgcaaatcgtgcgaagaatattcaaaa | |||
Mapping_target | Y50D7A | ||||
Type_of_mutation | Insertion | TTTTTTTTCAGATTGCAAACGTTGGGCCTGCCACGTACAATTATGACGAGACGCTTTCCACGCTGAA | |||
Deletion | |||||
PCR_product | ok3013_external | ||||
ok3013_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00032909 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00196135 | |||
WBGene00002230 | |||||
Transcript | Y50D7A.6.1 (11) | ||||
Y50D7A.6.4 (11) | |||||
Y50D7A.15 | VEP_consequence | transcript_ablation | |||
VEP_impact | HIGH | ||||
Exon_number | 1/1 | ||||
Y50D7A.6.3 (11) | |||||
Y50D7A.6.2 (11) | |||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |