WormBase Tree Display for Variation: WBVar00094112
expand all nodes | collapse all nodes | view schema
| WBVar00094112 | Name | Public_name | ok3026 | ||
|---|---|---|---|---|---|
| Other_name | W03G1.5.1:c.450_1071delinsCGA | ||||
| CE17283:p.Arg151GlufsTer? | |||||
| HGVSg | CHROMOSOME_IV:g.505414_506035delinsTCG | ||||
| Sequence_details | SMap | S_parent | Sequence | W03G1 | |
| Flanking_sequences | tccatggcgtcctggacaatgtggtgggcc | tcattttcgtcatcgctgctttccgatcct | |||
| Mapping_target | W03G1 | ||||
| Type_of_mutation | Insertion | TCG | |||
| Deletion | |||||
| PCR_product | ok3026_external | ||||
| ok3026_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00032920 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021011 | |||
| Transcript | W03G1.5.1 | VEP_consequence | frameshift_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | W03G1.5.1:c.450_1071delinsCGA | ||||
| HGVSp | CE17283:p.Arg151GlufsTer? | ||||
| cDNA_position | 450-1071 | ||||
| CDS_position | 450-1071 | ||||
| Protein_position | 150-357 | ||||
| Exon_number | 1/1 | ||||
| Codon_change | gaTCGCAAGAAGAAAGGTGAGCGTTCTGGAAGTTCCTCTTCTTCTTCTGGATCTTCCCGATCTCCATCTCGTGGAAGACGTGGAGGACGTGGTGGCCGCTCAGGATCCAGCTCGTCATCATCATCTTCTGAATCACGATCTCCCGGAAGACATGAGGAGCCCGAGAAGCAAGGAAAGAAAGAAGAGTTGAAGCAGCTGAAGAAGCAAAAGTCCGAAGGTGTTGAGCATCGTGGAAGATCGGGGTCACCGGGAGGACGTCGTGGACACGGTGGACGCCATGGATCCCGTTCTGGATCTCCAGGAGGTCGTCATGGTCATGGAGGCCACGGAGGACATGGATCACGCTCCGGATCTCCAGGTGGTCGTCATGGTCACGGAGGCTCAGGGCATCATCGTGGAGGTCGTCATGGAGGCCACGGAAGGCATGGATCGTGCTCCGGATCTCCACGAGGTCGTCATGGTCATGGAGGCCACGGAGGACATGGATCACGCTCCGGATCTCCAGGTGGTCGTCATGGTCACGGAGGCTCAGGGCATCATCGTGGAGGTCGTCATGGAGGCCACGGAAGGCATGGATCCCGCTCCGGATCTCCAGGAGGTCGTCATGGTCACGGAGGACGCCAC/gaCGA | ||||
| Amino_acid_change | DRKKKGERSGSSSSSSGSSRSPSRGRRGGRGGRSGSSSSSSSSESRSPGRHEEPEKQGKKEELKQLKKQKSEGVEHRGRSGSPGGRRGHGGRHGSRSGSPGGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRHGGHGRHGSCSGSPRGRHGHGGHGGHGSRSGSPGGRHGHGGSGHHRGGRHGGHGRHGSRSGSPGGRHGHGGRH/DX | ||||
| Isolation | Mutagen | EMS | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
