WormBase Tree Display for Variation: WBVar00094126

WBVar00094126 Name: Public_name: ok3041
    Other_name: T24D11.1d.1:c.413_1008+260delinsCTCCGATCCATTCCCATTTCCGATCCATTCCATTTCCGATCCACTCCGATCCATTCCCA
      T24D11.1b.1:c.713_1308+260delinsCTCCGATCCATTCCCATTTCCGATCCATTCCATTTCCGATCCACTCCGATCCATTCCCA
      T24D11.1a.1:c.533_1128+260delinsCTCCGATCCATTCCCATTTCCGATCCATTCCATTTCCGATCCACTCCGATCCATTCCCA
      T24D11.1e.1:c.722_1317+260delinsCTCCGATCCATTCCCATTTCCGATCCATTCCATTTCCGATCCACTCCGATCCATTCCCA
    HGVSg: CHROMOSOME_X:g.16406127_16406982delinsTGGGAATGGATCGGAGTGGATCGGAAATGGAATGGATCGGAAATGGGAATGGATCGGAG
  Sequence_details: SMap: S_parent: Sequence: T24D11
    Flanking_sequences: agattgagagaaaatgggaatggatcggag tgataacgttgaacagaagtgattggcctc
    Mapping_target: T24D11
    Type_of_mutation: Insertion: TGGGAATGGATCGGAGTGGATCGGAAATGGAATGGATCGGAAATGGGAATGGATCGGAG
      Deletion
    PCR_product: ok3041_external
      ok3041_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00032928
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00020770
    Transcript: T24D11.1d.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T24D11.1d.1:c.413_1008+260delinsCTCCGATCCATTCCCATTTCCGATCCATTCCATTTCCGATCCACTCCGATCCATTCCCA
        cDNA_position: 413-?
        CDS_position: 413-?
        Protein_position: 138-?
        Intron_number: 4/9
        Exon_number: 4/10
      T24D11.1a.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T24D11.1a.1:c.533_1128+260delinsCTCCGATCCATTCCCATTTCCGATCCATTCCATTTCCGATCCACTCCGATCCATTCCCA
        cDNA_position: 533-?
        CDS_position: 533-?
        Protein_position: 178-?
        Intron_number: 5/10
        Exon_number: 5/11
      T24D11.1e.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T24D11.1e.1:c.722_1317+260delinsCTCCGATCCATTCCCATTTCCGATCCATTCCATTTCCGATCCACTCCGATCCATTCCCA
        cDNA_position: 722-?
        CDS_position: 722-?
        Protein_position: 241-?
        Intron_number: 6/11
        Exon_number: 6/12
      T24D11.1b.1 VEP_consequence: splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: T24D11.1b.1:c.713_1308+260delinsCTCCGATCCATTCCCATTTCCGATCCATTCCATTTCCGATCCACTCCGATCCATTCCCA
        cDNA_position: 713-?
        CDS_position: 713-?
        Protein_position: 238-?
        Intron_number: 6/11
        Exon_number: 6/12
  Isolation: Mutagen: EMS
  Description: Phenotype: WBPhenotype:0000402 Paper_evidence: WBPaper00056338
        Curator_confirmed: WBPerson36360
      WBPhenotype:0002159 Paper_evidence: WBPaper00056338
        Curator_confirmed: WBPerson36360
  Reference: WBPaper00056338
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele