WormBase Tree Display for Variation: WBVar00094155

WBVar00094155 Name: Public_name: ok3074
    Other_name: H16O14.1d.1:c.1135-4_1601delinsTAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
      H16O14.1e.1:c.763-4_1229delinsTAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
      H16O14.1a.1:c.931-4_1397delinsTAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
      H16O14.1b.1:c.985-4_1451delinsTAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
      H16O14.1c.1:c.1054-4_1520delinsTAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
    HGVSg: CHROMOSOME_IV:g.6068284_6068865delinsTAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
  Sequence_details: SMap: S_parent: Sequence: H16O14
    Flanking_sequences: caaactaagtatttattcttttaacatttt agtaattctttttggatgtttcatgtcaac
    Mapping_target: H16O14
    Type_of_mutation: Insertion: TAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
      Deletion
    PCR_product: OK3074_external
      OK3074_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037336
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00019205
    Transcript: H16O14.1e.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: H16O14.1e.1:c.763-4_1229delinsTAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
        cDNA_position: ?-1229
        CDS_position: ?-1229
        Protein_position: ?-410
        Intron_number: 3-4/11
        Exon_number: 4-5/12
      H16O14.1d.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: H16O14.1d.1:c.1135-4_1601delinsTAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
        cDNA_position: ?-1601
        CDS_position: ?-1601
        Protein_position: ?-534
        Intron_number: 6-7/14
        Exon_number: 7-8/15
      H16O14.1b.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: H16O14.1b.1:c.985-4_1451delinsTAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
        cDNA_position: ?-1555
        CDS_position: ?-1451
        Protein_position: ?-484
        Intron_number: 6-7/15
        Exon_number: 7-8/16
      H16O14.1a.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: H16O14.1a.1:c.931-4_1397delinsTAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
        cDNA_position: ?-1397
        CDS_position: ?-1397
        Protein_position: ?-466
        Intron_number: 5-6/14
        Exon_number: 6-7/15
      H16O14.1c.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: H16O14.1c.1:c.1054-4_1520delinsTAAAAAGTATTTATTCTTTTAACATTCTTTTAACAC
        cDNA_position: ?-1796
        CDS_position: ?-1520
        Protein_position: ?-507
        Intron_number: 6-7/15
        Exon_number: 7-8/16
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele