WormBase Tree Display for Variation: WBVar00094173
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WBVar00094173 | Name | Public_name | ok3095 | ||
---|---|---|---|---|---|
HGVSg | CHROMOSOME_IV:g.9444527_9445059del | ||||
Sequence_details | SMap | S_parent | Sequence | F38E11 | |
Flanking_sequences | tgttcaccataagaaacgaggcgtctcctc | aaggaattctccaatgttcttcacatcaat | |||
Mapping_target | F38E11 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | OK3095_external | ||||
OK3095_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037273 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00201282 | |||
WBGene00002012 | |||||
WBGene00014366 | |||||
Transcript | F38E11.1.1 | VEP_consequence | coding_sequence_variant,3_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
cDNA_position | 397-? | ||||
CDS_position | 169-? | ||||
Protein_position | 57-? | ||||
Exon_number | 3-4/4 | ||||
F38E11.24 | VEP_consequence | transcript_ablation | |||
VEP_impact | HIGH | ||||
Exon_number | 1/1 | ||||
F38E11.10 | VEP_consequence | transcript_ablation | |||
VEP_impact | HIGH | ||||
Exon_number | 1/1 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |