WormBase Tree Display for Variation: WBVar00094177

WBVar00094177 Name: Public_name: ok3099
    Other_name: R08C7.3.1:c.143_*228del
    HGVSg: CHROMOSOME_IV:g.4446378_4446936del
  Sequence_details: SMap: S_parent: Sequence: R08C7
    Flanking_sequences: tcttgaagcagagaaccacttccagcggac cgtctgtatatcaagcatttcaaatgttcc
    Mapping_target: R08C7
    Type_of_mutation: Deletion
    PCR_product: OK3099_external
      OK3099_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00037355
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00019947
    Transcript: R08C7.3.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,stop_lost,3_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        HGVSc: R08C7.3.1:c.143_*228del
        cDNA_position: 163-671
        CDS_position: 143-?
        Protein_position: 48-?
        Intron_number: 2/3
        Exon_number: 2-4/4
  Isolation: Mutagen: EMS
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele