WormBase Tree Display for Variation: WBVar00094236

WBVar00094236 Name: Public_name: ok3163
    HGVSg: CHROMOSOME_II:g.5447518_5448195del
  Sequence_details: SMap: S_parent: Sequence: F56D1
    Flanking_sequences: cgcaaggaggagctatgatcatcacaaaag tataccgatggaatgagtacatatggattt
    Mapping_target: F56D1
    Type_of_mutation: Deletion
    PCR_product: ok3163_external
      ok3163_internal
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00033003
    Laboratory: RB
    Person: WBPerson46
    KO_consortium_allele
    Status: Live
  Affects: Gene: WBGene00023407
      WBGene00201245
    Transcript: F56D1.13 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        cDNA_position: ?-112
        Exon_number: 1/1
      F56D1.6.1 VEP_consequence: splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,5_prime_UTR_variant,intron_variant
        VEP_impact: HIGH
        cDNA_position: ?-419
        CDS_position: ?-417
        Protein_position: ?-139
        Intron_number: 2-3/5
        Exon_number: 1-4/6
  Isolation: Mutagen: EMS
  Description: Phenotype: WBPhenotype:0001418 Paper_evidence: WBPaper00044578
        Curator_confirmed: WBPerson12259
        Remark: Figure 5A Paper_evidence: WBPaper00044578
            Curator_confirmed: WBPerson12259
  Reference: WBPaper00044578
  Remark: Sequenced by the C. elegans Gene Knockout Consortium Paper_evidence: WBPaper00041807
  Method: KO_consortium_allele