WormBase Tree Display for Variation: WBVar00094318
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| WBVar00094318 | Name | Public_name | ok3266 | ||
|---|---|---|---|---|---|
| Other_name | K02E11.10.1:c.29_610delinsAGGGATCTGCTCAAGGAGTTCAGGGAA | ||||
| CE37979:p.Leu10_Gly204delinsGlnGlySerAlaGlnGlyValGlnGlyArg | |||||
| HGVSg | CHROMOSOME_V:g.14240542_14241123delinsTTCCCTGAACTCCTTGAGCAGATCCCT | ||||
| Sequence_details | SMap | S_parent | Sequence | K02E11 | |
| Flanking_sequences | cctgagcaggcccttgctgatatccggctc | ggcaggctaagatcacaacggatttcatct | |||
| Mapping_target | K02E11 | ||||
| Type_of_mutation | Insertion | TTCCCTGAACTCCTTGAGCAGATCCCT | |||
| Deletion | |||||
| PCR_product | OK3266_external | ||||
| OK3266_internal | |||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00037398 | ||||
| Laboratory | RB | ||||
| Person | WBPerson46 | ||||
| KO_consortium_allele | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00044109 | |||
| Transcript | K02E11.10.1 | VEP_consequence | protein_altering_variant | ||
| VEP_impact | MODERATE | ||||
| HGVSc | K02E11.10.1:c.29_610delinsAGGGATCTGCTCAAGGAGTTCAGGGAA | ||||
| HGVSp | CE37979:p.Leu10_Gly204delinsGlnGlySerAlaGlnGlyValGlnGlyArg | ||||
| cDNA_position | 29-610 | ||||
| CDS_position | 29-610 | ||||
| Protein_position | 10-204 | ||||
| Exon_number | 1/1 | ||||
| Codon_change | cTTGTCTCCACATCATCCGCCTTCCTCTTCGGTCTTCTTGGAGGAGGTGGTGGTGGTGGTGCCTGCTGCGGAGCTCCAGCTCCAGCTCCAGCTCTTGCCCCTGCACCAGCTGCTGGAGGATACGTGACCGCTCCATCTGCCCCAGCCCCACTCTTCCCATCCGCCCCAGCTCCAGCCATTCCAGCCGGAGGTTATGCAGTTGCCCCATCTGGAGGATTTGGCGGAGCCGGAGGATCTTATGCGGCTCCAGCTCTCGGTGGAGGACTCGGAGGATTTGGAGGAGCACCAGCTCCAGCTCCAGCATTCGGTGGACTTGGCGGTGGGTACCAAGCTGCTCCAGCTCTTGGAGGAGGTCTGGGAGGTGGCCTCGGAGGTGGACCCGGTGGAGGTTACCAGGCTGCTCCAGCTCTTCAACTTCCAGGACTTGGAGCTCCAGCACCAGCTTTTGGTGGACTCGGAGGAGGTTATCAAGGAGCTCCAACTCTCGGTGGAGGACAAGCTCAAGGAGGAGCCGGATACCAGCAGGGACCAGCTCAAGGAAGATTTGTTGCTCAACAGGGATCTGCTCAAGGAGTTCAGGGAGga/cAGGGATCTGCTCAAGGAGTTCAGGGAAga | ||||
| Amino_acid_change | LVSTSSAFLFGLLGGGGGGGACCGAPAPAPALAPAPAAGGYVTAPSAPAPLFPSAPAPAIPAGGYAVAPSGGFGGAGGSYAAPALGGGLGGFGGAPAPAPAFGGLGGGYQAAPALGGGLGGGLGGGPGGGYQAAPALQLPGLGAPAPAFGGLGGGYQGAPTLGGGQAQGGAGYQQGPAQGRFVAQQGSAQGVQGG/QGSAQGVQGR | ||||
| Isolation | Mutagen | EMS | |||
| Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
| Method | KO_consortium_allele |
