WormBase Tree Display for Variation: WBVar00094356
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WBVar00094356 | Name | Public_name | ok3322 | ||
---|---|---|---|---|---|
Other_name | JC8.2.1:c.1071_1200+348del | ||||
HGVSg | CHROMOSOME_IV:g.13234006_13234483del | ||||
Sequence_details | SMap | S_parent | Sequence | JC8 | |
Flanking_sequences | aaactgccgagaccataggtaatgtaattt | cttccatcatcagacgagcagaacgcggtg | |||
Mapping_target | JC8 | ||||
Type_of_mutation | Deletion | ||||
PCR_product | ok3322_external | ||||
ok3322_internal | |||||
SeqStatus | Sequenced | ||||
Variation_type | Allele | ||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00037417 | ||||
Laboratory | RB | ||||
Person | WBPerson46 | ||||
KO_consortium_allele | |||||
Status | Live | ||||
Affects | Gene | WBGene00010435 | |||
Transcript | JC8.2.1 | VEP_consequence | splice_donor_variant,coding_sequence_variant,intron_variant | ||
VEP_impact | HIGH | ||||
HGVSc | JC8.2.1:c.1071_1200+348del | ||||
cDNA_position | 1076-? | ||||
CDS_position | 1071-? | ||||
Protein_position | 357-? | ||||
Intron_number | 3/4 | ||||
Exon_number | 3/5 | ||||
Isolation | Mutagen | EMS | |||
Remark | Sequenced by the C. elegans Gene Knockout Consortium | Paper_evidence | WBPaper00041807 | ||
Method | KO_consortium_allele |