WormBase Tree Display for Variation: WBVar00094702
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WBVar00094702 | Evidence | Paper_evidence | WBPaper00042216 | ||||
---|---|---|---|---|---|---|---|
Name | Public_name | or209 | |||||
Other_name | or209ts | ||||||
ZK520.4b.1:c.2103+2T>A | |||||||
ZK520.4b.2:c.2103+2T>A | |||||||
ZK520.4d.1:c.2004+2T>A | |||||||
ZK520.4c.1:c.2154+2T>A | |||||||
HGVSg | CHROMOSOME_III:g.13691117T>A | ||||||
Sequence_details | SMap | S_parent | Sequence | ZK520 | |||
Flanking_sequences | agaaggagcaggaggccgtcgcgaatactg | agggttttcagtttgtttttcattggcgag | |||||
Mapping_target | ZK520 | ||||||
Type_of_mutation | Substitution | t | a | Paper_evidence | WBPaper00042216 | ||
SeqStatus | Sequenced | ||||||
Variation_type | Allele | ||||||
Origin | Species | Caenorhabditis elegans | |||||
Strain | WBStrain00007297 | ||||||
WBStrain00007298 | |||||||
Laboratory | EU | ||||||
Status | Live | ||||||
Affects | Gene | WBGene00000837 | |||||
Transcript | ZK520.4d.1 | VEP_consequence | splice_donor_variant | ||||
VEP_impact | HIGH | ||||||
HGVSc | ZK520.4d.1:c.2004+2T>A | ||||||
Intron_number | 6/8 | ||||||
ZK520.4b.2 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK520.4b.2:c.2103+2T>A | ||||||
Intron_number | 6/8 | ||||||
ZK520.4c.1 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK520.4c.1:c.2154+2T>A | ||||||
Intron_number | 6/7 | ||||||
ZK520.4b.1 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | ||||||
HGVSc | ZK520.4b.1:c.2103+2T>A | ||||||
Intron_number | 7/9 | ||||||
Interactor | WBInteraction000520430 | ||||||
Genetics | Interpolated_map_position | III | 21.3634 | ||||
Reference | WBPaper00042216 | ||||||
Method | Substitution_allele |