WormBase Tree Display for Variation: WBVar00094796
expand all nodes | collapse all nodes | view schema
WBVar00094796 | Evidence | Paper_evidence | WBPaper00006052 | ||||||
---|---|---|---|---|---|---|---|---|---|
Name | Public_name | ot38 | |||||||
Other_name | ot38a | ||||||||
CE33290:p.Val63Ala | |||||||||
R03C1.3a.1:c.638T>C | |||||||||
CE25964:p.Val213Ala | |||||||||
R03C1.3b.1:c.188T>C | |||||||||
HGVSg | CHROMOSOME_II:g.14904997T>C | ||||||||
Sequence_details | SMap | S_parent | Sequence | R03C1 | |||||
Flanking_sequences | cccaggagcttaacatgagcgagagtcaag | taaggtaggcatttgtaggcactttttccc | |||||||
Mapping_target | R03C1 | ||||||||
Type_of_mutation | Substitution | t | c | Paper_evidence | WBPaper00006052 | ||||
SeqStatus | Sequenced | ||||||||
Variation_type | Allele | ||||||||
Origin | Species | Caenorhabditis elegans | |||||||
Strain | WBStrain00029298 | ||||||||
Laboratory | OH | ||||||||
Status | Live | ||||||||
Affects | Gene | WBGene00000584 | |||||||
Transcript | R03C1.3b.1 (12) | ||||||||
R03C1.3a.1 (12) | |||||||||
Genetics | Interpolated_map_position | II | 23.6958 | ||||||
Description | Phenotype | WBPhenotype:0000688 | Paper_evidence | WBPaper00006052 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Penetrance | Complete | Paper_evidence | WBPaper00006052 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Life_stage | WBls:0000041 | PATO:0000460 | Paper_evidence | WBPaper00006052 | ||||
Curator_confirmed | WBPerson2021 | ||||||||
WBPhenotype:0001660 | Paper_evidence | WBPaper00006052 | |||||||
WBPaper00030973 | |||||||||
Curator_confirmed | WBPerson2021 | ||||||||
Remark | ASE asymmetry is disrupted (as seen with lim-6 reporters). 2 ASEL | Paper_evidence | WBPaper00006052 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
ASE asymmetry is disrupted. 2 ASEL | Paper_evidence | WBPaper00030973 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Penetrance | Complete | Paper_evidence | WBPaper00006052 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
100 percent | Paper_evidence | WBPaper00030973 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Recessive | Paper_evidence | WBPaper00030973 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
EQ_annotations | Anatomy_term | WBbt:0005663 | PATO:0000460 | Paper_evidence | WBPaper00006052 | ||||
WBPaper00030973 | |||||||||
Curator_confirmed | WBPerson2021 | ||||||||
Life_stage | WBls:0000041 | PATO:0000460 | Paper_evidence | WBPaper00006052 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Phenotype_assay | Temperature | 25C | Paper_evidence | WBPaper00030973 | |||||
Curator_confirmed | WBPerson2021 | ||||||||
Genotype | otIs6, otIs114 | Paper_evidence | WBPaper00006052 | ||||||
Curator_confirmed | WBPerson2021 | ||||||||
otIs6 [lim-6p::GFP] | Paper_evidence | WBPaper00030973 | |||||||
Curator_confirmed | WBPerson2021 | ||||||||
Reference | WBPaper00006052 | ||||||||
WBPaper00030973 | |||||||||
Method | Substitution_allele |