WormBase Tree Display for Variation: WBVar00095290
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WBVar00095290 | Name | Public_name | WBVar00095290 | ||
---|---|---|---|---|---|
Other_name | pas149 | ||||
cewivar00066979 | |||||
CE33587:p.Leu73= | |||||
Y18H1A.7a.1:c.219G>A | |||||
HGVSg | CHROMOSOME_I:g.719357C>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y18H1A | |
Flanking_sequences | gcaaatcttcgaaattttgacaagttttctgattttcggcgtagatttcgcaatttctgacggtttttctgcaaatctcggtgattttgggctcggggagcttccagctgctctattgttcagaattgtctgctcagtagcgggggcgtcttgattttcagtagaattcgcagtttccggcaatttttctgagctaatctttggaatttcgacaggttttctgacttttggcgtagattttgcagtttctggtgattttcggcacgatgagctcccagcttcttcattattcagcctttt | agctgggcttcttgagagcctgtaatcacgtcgccgtcgtcatcctctgaatcatcatccgaccaaatttcgattatttcctgaaaaaatcgattttttttgcttttttttgctcttttctcattgtcagcttttcccactttccagcaatttctccacggcgtcggaacgtatcctggtcgccgatcgaactggataactggccggctggcgataaatcggcgaagatctgctactatctcgtctgaaaacgtttttctgctaaaacctgctaaaaatctggctaaaatcacctgataa | |||
Mapping_target | Y18H1A | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (14) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00004332 | |||
Transcript | Y18H1A.7a.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | Y18H1A.7a.1:c.219G>A | ||||
HGVSp | CE33587:p.Leu73= | ||||
cDNA_position | 479 | ||||
CDS_position | 219 | ||||
Protein_position | 73 | ||||
Exon_number | 4/7 | ||||
Codon_change | ctG/ctA | ||||
Amino_acid_change | L | ||||
Method | WGS_Pasadena_Quinlan |