WormBase Tree Display for Variation: WBVar00095741
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WBVar00095741 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00095741 | |||
Other_name | pas600 | ||||
haw16473 | |||||
cewivar00076372 | |||||
T27A1.6.1:c.312-684T>C | |||||
HGVSg | CHROMOSOME_II:g.518535T>C | ||||
Sequence_details | SMap | S_parent | Sequence | T27A1 | |
Flanking_sequences | cccaaaaccaaattttaagcgaagatcgtggtaaaatttttttggacgatttccaaaattatggaaaaaattttttgtaaaaatttttgaaaattcgaatttcaaaatattttcaacaagttgaaatctctacaattccaccaaatttttaaaaatattactacaaccacgttttctcaaaaaaaatcaataacccgtcccgatccgaacacctacagtaccccctgtcaaaggtaccccgcccaatcaatttgtgtggtttgtagggaatatggttgtatttgtaattggtttcatctt | ttgaatgtcttttttttcttcgtcgtcttcaacatttctctgaatacccatcaaataccacattcatcaattcagaagatgtagtagtacggagggctgtgattgaattctgtctttgatgggtcacttgggaattaggattactgtagaatagataatgattttggtgatgggaaatgtcaagtaatatagaaaaataattagagtacaaaatattgaaaatatgatgaaaaaatgtcaattttgaagaaagttatgatggtttaaaaaaatttgaaaaaaaattggaaatttttccaa | |||
Mapping_target | T27A1 | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (15) | |||||
Laboratory | AX | ||||
RW | |||||
Person | WBPerson6900 | ||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
WGS_Hawaiian_Waterston | |||||
History | Acquires_merge | WBVar00163223 | |||
WBVar01358052 | |||||
WBVar01291974 | |||||
Status | Live | ||||
Affects | Gene | WBGene00003106 | |||
Transcript | T27A1.6.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T27A1.6.1:c.312-684T>C | ||||
Intron_number | 4/10 | ||||
Reference | WBPaper00037807 | ||||
Method | WGS_Pasadena_Quinlan |