WormBase Tree Display for Variation: WBVar00101343
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| WBVar00101343 | Name | Public_name | WBVar00101343 | ||
|---|---|---|---|---|---|
| Other_name | pas6202 | ||||
| cewivar00115750 | |||||
| R12H7.1a.2:c.-43+1017G>T | |||||
| HGVSg | CHROMOSOME_X:g.13202870G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F09D5 | |
| Flanking_sequences | cgcacattgtgcgcgattattttctcattttataaactactcctacgtctttgtcgtcttcctccgtcccaccatgcagcattgcttgagaccacaacaccgccctgatttataacatgtctagatttcagttcaacattttttttgattgaaatgctaatttgaaaatgttaaaggacaggtgctttttagtggaataagcctttgaaatttagctattagtcttgtaggtgattctttgagtaacgttttttttctttttttttttgctaaaaactcaagaaattggtatttctgtac | atgatcccacttccaagtcttgaaacatttatttaacagatccgcagtgcacagagcttaaagaacagattttcttttgatcctttaattcaatcttacagtttttgaagtaaaaaatccttacgttttcagtgttaccaaaatttaaaaaaaaactgcaaaaaatgcccaaatttcgaattgcttctcaataaaactagcaatattgaaattgctataatttttctatcaacacactatcactaaacactatcactaaaataagtttcaaaagttgtgtagtggggatttttctaaata | |||
| Mapping_target | F09D5 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (31) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006749 | |||
| Transcript | R12H7.1a.2 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R12H7.1a.2:c.-43+1017G>T | ||||
| Intron_number | 1/10 | ||||
| Method | WGS_Pasadena_Quinlan |
