WormBase Tree Display for Variation: WBVar00101350
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| WBVar00101350 | Name | Public_name | WBVar00101350 | ||
|---|---|---|---|---|---|
| Other_name | pas6209 | ||||
| cewivar00115777 | |||||
| CE43009:p.Gly299= | |||||
| R12H7.4.1:c.897T>C | |||||
| HGVSg | CHROMOSOME_X:g.13218546T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | R12H7 | |
| Flanking_sequences | aaccattcgtgaatttttagatcatacgtatgaacaaactgttactattatgcaaaacgtcattttaatttattgcaattatcaaaccgctaattgtttttgagccagatatgcatgaaactatggctttaataaaattcaattcagaaactctacttgtttattctggtcaccttcatgacactcctatttggaccagctctttttgtttgccacacatatggacatttgaatgtaagcaactgatttttcatgcacagtctgtttttttgcttttcagacctgtcagaagtgggctgg | tcggggtgttttgctagtttatacgctatgtgtccaccgaaaccttcaacatatgaaaaagataaagatgatgaagaagatgagaagattgaaaatcctcaggaaaaaacacctctagaaaatgaagatgaaaatccagaaaagcaacctggagctggcgactcgaaagagccagatgagacatcaggaaatagtagtccgaaaaaatcaacacaaagaggaaaaggactggtgagtgttgctatcaattttgatgtgtctactatatttatttttctaggaccccacaaagcacacaga | |||
| Mapping_target | R12H7 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (31) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00011255 | |||
| Transcript | R12H7.4.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | R12H7.4.1:c.897T>C | ||||
| HGVSp | CE43009:p.Gly299= | ||||
| cDNA_position | 932 | ||||
| CDS_position | 897 | ||||
| Protein_position | 299 | ||||
| Exon_number | 9/11 | ||||
| Codon_change | ggT/ggC | ||||
| Amino_acid_change | G | ||||
| Method | WGS_Pasadena_Quinlan |
