WormBase Tree Display for Variation: WBVar00109312

WBVar00109312 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00109312
    Other_name: cbs44833
    HGVSg: chrIV:g.12168446A>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc0081
    Flanking_sequences: aaacgatttgcgctcttccgcgtctatcaaagtgtcactgactccatcac atttctggagatactatcccggttcacagcactcgagtgtggttcccatc
    Mapping_target: cb25.fpc0081
    Type_of_mutation: Substitution: A C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (11)
      Polymorphic_strain_digest (11)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00027100
    Transcript: CBG04432.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG04432.1:c.1440A>C
        HGVSp: CBP36463.1:p.Thr480%3D
        cDNA_position: 1539
        CDS_position: 1440
        Protein_position: 480
        Exon_number: 9/17
        Codon_change: acA/acC
        Amino_acid_change: T
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP