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WormBase Tree Display for Variation: WBVar00115236

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Name Class

WBVar00115236EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00115236
Other_namecbs50757
Sequence_detailsSMapS_parentSequencecb25.fpc2234
Flanking_sequencesgaattgtttgtctgtttgatcaaaaatatcaaaactcgaaaaaatttttgtcgaaaaaaatcacataagggtcataaaagttctctggggtgttctgatt
Mapping_targetcb25.fpc2234
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digestGATCBfuCI, BscFI, Bsp143I, BstENII, BstKTI, ChaI, DpnI, DpnII, Kzo9I, MboI, NdeII, Sau3AI471 186 161 69 44 37 32
CACHindI354 142 89 74 69 66 55 47 29 28 19 16 6 4 2
AATTSse9I, TasI, Tsp509I, TspEI123 116 81 78 74 70 68 68 49 43 41 32 29 29 28 21 16 16 13 5
Polymorphic_strain_digestGATCBfuCI, BscFI, Bsp143I, BstENII, BstKTI, ChaI, DpnI, DpnII, Kzo9I, MboI, NdeII, Sau3AI471 218 161 69 44 37
CACHindI234 142 120 89 74 69 66 55 47 29 28 19 16 6 4 2
AATTSse9I, TasI, Tsp509I, TspEI123 116 81 78 74 70 68 68 49 47 43 41 32 29 28 21 16 16
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP