Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Variation: WBVar00115240

expand all nodes | collapse all nodes | view schema

Name Class

WBVar00115240EvidencePaper_evidenceWBPaper00030778
NamePublic_nameWBVar00115240
Other_namecbs50761
Sequence_detailsSMapS_parentSequencecb25.fpc2234
Flanking_sequencesccggtagcaaaaattttgtcattttgagccaaaattcgagctctcaattcattttctccatttttttttgtgtttttgaattgtttgtctgtttgatcaa
Mapping_targetcb25.fpc2234
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digestGATCBfuCI, BscFI, Bsp143I, BstENII, BstKTI, ChaI, DpnI, DpnII, Kzo9I, MboI, NdeII, Sau3AI549 186 161 69 32 3
CACHindI354 167 74 69 66 64 55 47 29 28 19 16 6 4 2
AATTSse9I, Tas, I, Tsp509I, TspEI123 116 96 81 78 70 68 50 49 43 41 29 29 28 28 21 16 16 13 5
Polymorphic_strain_digestGATCBfuCI, BscFI, Bsp143I, BstENII, BstKTI, ChaI, DpnI, DpnII, Kzo9I, MboI, NdeII, Sau3AI549 218 161 69 3
CACHindI234 167 120 74 69 66 64 55 47 29 28 19 16 6 4 2
AATTSse9I, Tas, I, Tsp509I, TspEI123 116 96 81 78 70 68 50 49 47 43 41 29 28 28 21 16 16
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
ReferenceWBPaper00030778
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP