WormBase Tree Display for Variation: WBVar00115264

WBVar00115264 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115264
    Other_name: cbs50785
    HGVSg: chrIII:g.8538118C>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: ttcccacctggaatttcatcaaatcgtcaatctcaacgaatccaacagaa acgcttttctactatgacacgatgcaacgtcatcagcatgtggttcctga
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: CAC HindI 146 98 94 76 75 64 64 55 49 41 40 31 28 26 23 20 17 12 11 9 9 6 3 3
      Polymorphic_strain_digest: CAC HindI 146 98 94 76 75 64 55 49 41 40 39 31 28 26 25 23 20 17 12 11 9 9 6 3 3
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031311
    Transcript: CBG09791.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG09791.1:c.176C>T
        HGVSp: CBP08414.1:p.Ser59Phe
        cDNA_position: 176
        CDS_position: 176
        Protein_position: 59
        Exon_number: 2/3
        Codon_change: tCt/tTt
        Amino_acid_change: S/F
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP