WormBase Tree Display for Variation: WBVar00115318

WBVar00115318 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00115318
    Other_name: cbs50839
      cb50839 Paper_evidence: WBPaper00055507
    HGVSg: chrIII:g.8618874T>G
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: tcactttggcgttgtgtgctgggat ttcttggaaaggacctccttcaagt
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GATC BfuCI, BscFI, Bsp143I, BstENII, BstKTI, ChaI, DpnI, DpnII, Kzo9I, MboI, NdeII, Sau3AI 530 470
        RGATCY BstX2I, BstYI, MflI, PsuI, XhoII 530 470
      Polymorphic_strain_digest: GATC BfuCI, BscFI, Bsp143I, BstENII, BstKTI, ChaI, DpnI, DpnII, Kzo9I, MboI, NdeII, Sau3AI 496 470 34
        RGATCY BstX2I, BstYI, MflI, PsuI, XhoII 496 470 34
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031330
    Transcript: CBG09810.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG09810.1:c.126A>C
        HGVSp: CBP02471.1:p.Asn42%3D
        cDNA_position: 146
        CDS_position: 126
        Protein_position: 42
        Exon_number: 2/6
        Codon_change: aaT/aaC
        Amino_acid_change: N
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP