WormBase Tree Display for Variation: WBVar00115319

WBVar00115319 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115319
    Other_name: cbs50840
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: ctgtaaactgataaattatttttcattatatcagaaacattttatcagtt acccattttttatatcttctacagaaactgagataaattagctcaaactt
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: ACNGT Bst4CI, HpyCH4III, TaaI, Tsp4CI 512 451 37
        GTTAAC BstHPI, HpaI, KspAI 1000
        GTNNAC Hpy8I 500 390 65 45
        TTAA MseI, Tru1I, Tru9I 508 280 115 97
        AATT Sse9I, TasI, Tsp509I, TspEI 460 249 73 63 62 56 26 11
      Polymorphic_strain_digest: ACNGT Bst4CI, HpyCH4III, TaaI, Tsp4CI 963 37
        GTTAAC BstHPI, HpaI, KspAI 500 500
        GTNNAC Hpy8I 500 435 65
        TTAA MseI, Tru1I, Tru9I 287 280 174 115 97 47
        AATT Sse9I, TasI, Tsp509I, TspEI 460 249 74 62 62 56 26 11
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP