WormBase Tree Display for Variation: WBVar00115322

WBVar00115322 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115322
    Other_name: cbs50843
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: tttttctcggttcctgccaaagattttctgggttgccgaagaagaaaact taaactgataaattatttttcattatatcagaaacattttatcagttgac
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: G T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: ACNGT Bst4CI, HpyCH4III, TaaI, Tsp4CI 501 499
        GTTAAC BstHPI, HpaI, KspAI 1000
        GTNNAC Hpy8I 452 390 113 45
        TTAA MseI, Tru1I, Tru9I 508 328 115 49
        AATT Sse9I, TasI, Tsp509I, TspEI 412 297 73 63 62 56 26 11
      Polymorphic_strain_digest: ACNGT Bst4CI, HpyCH4III, TaaI, Tsp4CI 1000
        GTTAAC BstHPI, HpaI, KspAI 548 452
        GTNNAC Hpy8I 452 435 113
        TTAA MseI, Tru1I, Tru9I 328 287 174 115 49 47
        AATT Sse9I, TasI, Tsp509I, TspEI 412 297 74 62 62 56 26 11
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP