WormBase Tree Display for Variation: WBVar00115324

WBVar00115324 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00115324
    Other_name: cbs50845
      cb50845 Paper_evidence: WBPaper00055507
    HGVSg: chrIII:g.8680309C>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: tggaggtgttccatctggagcttcc caatgactgctgttggtggagcccc
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: G T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (12)
      Polymorphic_strain_digest (12)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031349
    Transcript: CBG09831a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG09831a.1:c.529C>T
        HGVSp: CBP08427.1:p.Ala177Ser
        cDNA_position: 554
        CDS_position: 529
        Protein_position: 177
        Exon_number: 3/6
        Codon_change: Gca/Tca
        Amino_acid_change: A/S
      CBG09831b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: CBG09831b.1:c.313+216C>T
        Intron_number: 3/5
      CBG09831c.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG09831c.1:c.529C>T
        HGVSp: CBP45015.1:p.Ala177Ser
        cDNA_position: 529
        CDS_position: 529
        Protein_position: 177
        Exon_number: 2/6
        Codon_change: Gca/Tca
        Amino_acid_change: A/S
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP