WormBase Tree Display for Variation: WBVar00115351

WBVar00115351 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115351
    Other_name: cbs50872
    HGVSg: chrIII:g.8885126T>G
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: ctacaaagtgattcaggaaattcggatgcaaccatgggtgctccaatcgg ccggctctagctcatgccttttgtcgtgagttctagttttcttctgaaag
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: A C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (15)
      Polymorphic_strain_digest (15)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031386
    Transcript: CBG09872a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG09872a.1:c.309A>C
        HGVSp: CBP25812.1:p.Gly103%3D
        cDNA_position: 309
        CDS_position: 309
        Protein_position: 103
        Exon_number: 2/7
        Codon_change: ggA/ggC
        Amino_acid_change: G
      CBG09872b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG09872b.1:c.18A>C
        HGVSp: CBP40139.1:p.Gly6%3D
        cDNA_position: 352
        CDS_position: 18
        Protein_position: 6
        Exon_number: 2/7
        Codon_change: ggA/ggC
        Amino_acid_change: G
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP