WormBase Tree Display for Variation: WBVar00115398

WBVar00115398 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115398
    Other_name: cbs50919
    HGVSg: chrIII:g.9031366A>G
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: atctcatgacattaatcccggattggaaaagtataatagcttggaataca gtgtgatcttcaatatcaatatctggaatcatgtccatcggaagatttac
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (36)
      Polymorphic_strain_digest (36)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031419
    Transcript: CBG09915.1 VEP_consequence: missense_variant,splice_region_variant
        VEP_impact: MODERATE
        HGVSc: CBG09915.1:c.130T>C
        HGVSp: CBP16751.1:p.Tyr44His
        cDNA_position: 130
        CDS_position: 130
        Protein_position: 44
        Exon_number: 1/5
        Codon_change: Tat/Cat
        Amino_acid_change: Y/H
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP