WormBase Tree Display for Variation: WBVar00115440

WBVar00115440 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115440
    Other_name: cbs50961
    HGVSg: chrIII:g.9257102C>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: atctattgctcaattttggaagctttgaattttccgaaatcaacataccg tcctccgtcttgctcgaaagcggtagccatagcttcagcgttcgacgaca
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: G T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (12)
      Polymorphic_strain_digest (12)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031472
    Transcript: CBG09983.1 VEP_consequence: missense_variant,splice_region_variant
        VEP_impact: MODERATE
        HGVSc: CBG09983.1:c.52C>A
        HGVSp: CBP02436.1:p.Pro18Thr
        cDNA_position: 70
        CDS_position: 52
        Protein_position: 18
        Exon_number: 2/5
        Codon_change: Ccg/Acg
        Amino_acid_change: P/T
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP