WormBase Tree Display for Variation: WBVar00115445

WBVar00115445 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115445
    Other_name: cbs50966
    HGVSg: chrIII:g.9270455G>A
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: agccaatcgaattctttcacttgaagtccaacatatttttcaaaaatctt tggacatgcaccgtggagttagctcagatcttttccagctggacggcgac
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: C T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest (16)
      Polymorphic_strain_digest (16)
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031478
    Transcript: CBG09989.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: CBG09989.1:c.637C>T
        HGVSp: CBP16766.1:p.Leu213%3D
        cDNA_position: 637
        CDS_position: 637
        Protein_position: 213
        Exon_number: 5/13
        Codon_change: Ctg/Ttg
        Amino_acid_change: L
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP