WormBase Tree Display for Variation: WBVar00115468

WBVar00115468 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115468
    Other_name: cbs50989
    HGVSg: chrIII:g.9299886G>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: gatttcttacattttctacatctgtctttatctctcctactgaagacttc cctcttttacaacttgatcaaccttttttgcaatatcgttctctgttttt
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: TGCA CviRI, HpyCH4V 497 269 114 86 31 3
        CAC HindI 5 45 43 37 34 34 33 33 31 30 21 17 14 12 9 7 4 3 2
      Polymorphic_strain_digest: TGCA CviRI, HpyCH4V 497 269 114 86 34
        CAC HindI 136 89 71 69 68 62 51 45 45 43 37 34 34 34 33 33 30 21 17 14 12 9 7 4 2
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031486
    Transcript: CBG09998.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG09998.1:c.965G>T
        HGVSp: CBP44134.1:p.Gly322Val
        cDNA_position: 1034
        CDS_position: 965
        Protein_position: 322
        Exon_number: 9/16
        Codon_change: gGg/gTg
        Amino_acid_change: G/V
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP