WormBase Tree Display for Variation: WBVar00115482

WBVar00115482 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115482
    Other_name: cbs51003
    HGVSg: chrIII:g.9394645C>T
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: tagttgttgaggtggaagtcgatgtggatgttgaagtggatgttgtcgtc gtggagaagattgtgttgcaggatgagttggagttgtagaaggagttgtt
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: G A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: RGCY CviJI, CviTI 200 163 156 101 100 66 65 61 38 28 22
        CGWCG Hpy99I 496 399 66 39
        AATT Sse9I, TasI, Tsp509I, TspEI 241 236 136 120 81 60 51 29 22 12 12
      Polymorphic_strain_digest: RGCY CviJI, CviTI 200 163 162 156 100 66 65 38 28 22
        CGWCG Hpy99I 562 399 39
        AATT Sse9I, TasI, Tsp509I, TspEI 241 236 136 90 81 60 51 30 29 22 12 12
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031511
    Transcript: CBG10025.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG10025.1:c.320C>T
        HGVSp: CBP45085.1:p.Pro107Leu
        cDNA_position: 320
        CDS_position: 320
        Protein_position: 107
        Exon_number: 2/2
        Codon_change: cCg/cTg
        Amino_acid_change: P/L
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP