WormBase Tree Display for Variation: WBVar00115506

WBVar00115506 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115506
    Other_name: cbs51027
    HGVSg: chrIII:g.9453945T>C
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: gtgcagcaataagagcaatacaaatggcgatataaaatccagaaagtaca gacacacccaaaaagatacagtatagaaacgagatggttttgaaccacgg
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: GATNNNNATC BsaBI, Bse8I, BseJI, BsiBI, BsrBRI, MamI 1000
        TCNNGA Hpy178III, Hpy188III 400 216 211 91 82
      Polymorphic_strain_digest: GATNNNNATC BsaBI, Bse8I, BseJI, BsiBI, BsrBRI, MamI 517 483
        TCNNGA Hpy178III, Hpy188III 611 216 91 82
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031524
    Transcript: CBG10042.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG10042.1:c.980T>C
        HGVSp: CBP22326.1:p.Leu327Pro
        cDNA_position: 1202
        CDS_position: 980
        Protein_position: 327
        Exon_number: 7/8
        Codon_change: cTt/cCt
        Amino_acid_change: L/P
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP