WormBase Tree Display for Variation: WBVar00115510

WBVar00115510 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00115510
    Other_name: cbs51031
      cb51031 Paper_evidence: WBPaper00055507
    HGVSg
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: cattcttcgttccaattcgtgatcg aactcctattcccaaatgtctggag
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: TCGA EsaBC3I, TaqI, TthHB8I 332 270 202 170 26
        GTNAC MaeIII 798 113 62 27
      Polymorphic_strain_digest: TCGA EsaBC3I, TaqI, TthHB8I 534 270 170 26
        GTNAC MaeIII 409 389 113 62 27
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031525
    Transcript: CBG10043.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSp: CBP02444.1:p.Arg224%3D
        cDNA_position: 698
        CDS_position: 672
        Protein_position: 224
        Exon_number: 7/12
        Codon_change: cgT/cgA
        Amino_acid_change: R
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP