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WormBase Tree Display for Variation: WBVar00115517

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Name Class

WBVar00115517EvidencePaper_evidenceWBPaper00030778
WBPaper00055507
NamePublic_nameWBVar00115517
Other_namecbs51038
cb51038Paper_evidenceWBPaper00055507
Sequence_detailsSMapS_parentSequencecb25.fpc2234
Flanking_sequencestaaagaacttctaacttgtcccataatcttattaccgatcttgttacata
Mapping_targetcb25.fpc2234
Type_of_mutationSubstitutionGT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
RFLPReference_strain_digestRGCYCviJI, CviTI322 207 204 91 65 40 26 23 14 8
TCNGAHpy188I334 174 135 122 89 88 36 22
GTNACMaeIII443 334 75 74 56 18
Polymorphic_strain_digestRGCYCviJI, CviTI322 207 204 91 65 49 40 14 8
TCNGAHpy188I334 262 122 96 89 39 36 22
GTNACMaeIII339 334 104 75 74 56 18
Natural_variant
OriginSpeciesCaenorhabditis briggsae
StrainWBStrain00041077
LaboratoryCP
PersonWBPerson3706
WBPerson227
WBPerson225
StatusLive
ReferenceWBPaper00030778
WBPaper00055507
RemarkPredicted by: ssaha-SNP v2.0
This SNP was observed in 1 sequencing read(s)
MethodSNP