WormBase Tree Display for Variation: WBVar00115542

WBVar00115542 Evidence: Paper_evidence: WBPaper00030778
  Name: Public_name: WBVar00115542
    Other_name: cbs51063
    HGVSg: chrIII:g.9530717C>G
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: tgaatggagagaatgcaatatccttcacggcgataagctccttctgttgc gaacgacgagatgggcaagagagcgttctttgcatcctgggagaacataa
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: G C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: CCGC AciI 499 276 146 79
        CCNNNNNNNGG Bsc4I, BseLI, BsiYI, BslI 441 313 201 23 22
      Polymorphic_strain_digest: CCGC AciI 775 146 79
        CCNNNNNNNGG Bsc4I, BseLI, BsiYI, BslI 441 313 149 52 23 22
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Affects: Gene: WBGene00031546
    Transcript: CBG10067.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: CBG10067.1:c.605C>G
        HGVSp: CBP02460.1:p.Pro202Arg
        cDNA_position: 605
        CDS_position: 605
        Protein_position: 202
        Exon_number: 3/8
        Codon_change: cCg/cGg
        Amino_acid_change: P/R
  Reference: WBPaper00030778
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP