WormBase Tree Display for Variation: WBVar00115567

WBVar00115567 Evidence: Paper_evidence: WBPaper00030778
      WBPaper00055507
  Name: Public_name: WBVar00115567
    Other_name: cbs51088
      cb51088 Paper_evidence: WBPaper00055507
  Sequence_details: SMap: S_parent: Sequence: cb25.fpc2234
    Flanking_sequences: aaatttcaaccaaattctaggaatt gaaaagtgttatttctggaaaatca
    Mapping_target: cb25.fpc2234
    Type_of_mutation: Substitution: A G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    RFLP: Reference_strain_digest: ATTAAT AseI, AsnI, PshBI, VspI 582 268 150
        TTCGAA AsuII, Bpu14I, BsiCI, Bsp119I, BspT104I, BstBI, Csp45I, LspI, NspV, SfuI 1000
        GAATTC EcoRI, FunII 298 258 232 212
        TCGA EsaBC3I, TaqI, TthHB8I 946 54
        TTAA MseI, Tru1I, Tru9I 527 186 150 82 55
        AATT Sse9I, TasI, Tsp509I, TspEI 207 90 86 84 72 70 57 54 48 37 35 25 22 21 16 11 11 9 9 7 7 7 6 5 4
      Polymorphic_strain_digest: ATTAAT AseI, AsnI, PshBI, VspI 582 418
        TTCGAA AsuII, Bpu14I, BsiCI, Bsp119I, BspT104I, BstBI, Csp45I, LspI, NspV, SfuI 501 499
        GAATTC EcoRI, FunII 298 258 212 197 35
        TCGA EsaBC3I, TaqI, TthHB8I 6 54
        TTAA MseI, Tru1I, Tru9I 527 336 82 55
        AATT Sse9I, TasI, Tsp509I, TspEI 207 90 86 84 72 70 57 54 48 41 35 25 22 21 16 11 11 9 9 7 7 7 6 5
    Natural_variant
  Origin: Species: Caenorhabditis briggsae
    Strain: WBStrain00041077
    Laboratory: CP
    Person: WBPerson3706
      WBPerson227
      WBPerson225
    Status: Live
  Reference: WBPaper00030778
    WBPaper00055507
  Remark: Predicted by: ssaha-SNP v2.0
    This SNP was observed in 1 sequencing read(s)
  Method: SNP